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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621705 chr22:33867464 A/G LZTR1 chr22:21333751-21353327:+ 0.59 6.17 1.45E-9 Box Plot
THCA rs9621705 chr22:33867464 A/G PICK1 chr22:38452318-38471708:+ 0.6 6.4 3.67E-10 Box Plot
THCA rs9621705 chr22:33867464 A/G TOMM22 chr22:39077953-39081426:+ 0.57 6 3.99E-9 Box Plot
THCA rs9621705 chr22:33867464 A/G TRMU chr22:46726772-46753237:+ 0.48 6.3 6.7E-10 Box Plot
THCA rs9621705 chr22:33867464 A/G TXN2 chr22:36863083-36878077:- 0.56 6.5 2.01E-10 Box Plot
THCA rs9621705 chr22:33867464 A/G UFD1L chr22:19437433-19466738:- 0.56 5.99 4.21E-9 Box Plot
THCA rs9624236 chr22:23969362 T/C IGLL3 chr22:25713888-25716191:+ 0.66 11.51 3.15E-27 Box Plot
THCA rs9624237 chr22:23969420 T/C IGLL3 chr22:25713888-25716191:+ 0.64 11.35 1.3E-26 Box Plot
THCA rs9624247 chr22:23980933 C/T IGLL3 chr22:25713888-25716191:+ 0.72 10.21 2.77E-22 Box Plot
THCA rs9624248 chr22:23980941 T/C IGLL3 chr22:25713888-25716191:+ 0.73 10.48 2.84E-23 Box Plot
THCA rs9624259 chr22:23991975 C/T IGLL3 chr22:25713888-25716191:+ 0.72 10.42 4.85E-23 Box Plot
THCA rs9624267 chr22:24000528 G/T IGLL3 chr22:25713888-25716191:+ 0.7 9.85 5.6E-21 Box Plot
THCA rs9624268 chr22:24000549 T/C IGLL3 chr22:25713888-25716191:+ 0.66 9.36 3.06E-19 Box Plot
THCA rs9624269 chr22:24000567 G/A IGLL3 chr22:25713888-25716191:+ 0.66 9.36 3.06E-19 Box Plot
THCA rs9624270 chr22:24000569 C/G IGLL3 chr22:25713888-25716191:+ 0.67 9.51 9.02E-20 Box Plot